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| Package 195/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
| Ruuid 1.16.1 Biocore Team c/o BioC user list Last Changed Date: 2007-10-06 15:08:14 -0700 Last Changed Rev: 27821 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
| wellington | Linux (SUSE 9.2) | i686 | OK | [ OK ] | ||
| liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | OK | OK | |
| pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
| Package: Ruuid |
| Version: 1.16.1 |
| Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD check Ruuid_1.16.1.tar.gz |
| RetCode: 0 |
| Time: 52.9 seconds |
| Status: OK |
| CheckDir: Ruuid.Rcheck |
| Warnings: 0 |
* checking for working latex ... OK * using log directory '/extra/loc/biocbuild/bbs-2.1-bioc/meat/Ruuid.Rcheck' * using R version 2.6.0 (2007-10-03) * checking for file 'Ruuid/DESCRIPTION' ... OK * this is package 'Ruuid' version '1.16.1' * checking package name space information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'Ruuid' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking for unstated dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking for portable compilation flags in Makevars ... OK * checking for portable use of $BLAS_LIBS ... OK * creating Ruuid-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating Ruuid-manual.tex ... OK * checking Ruuid-manual.tex ... OK
Ruuid.Rcheck/00install.out:
* Installing *source* package 'Ruuid' ...
checking for pkg-config... /usr/bin/pkg-config
checking for glib-config... /opt/gnome/bin/glib-config
checking for glib-2.0... yes
checking PKG_CFLAGS... -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include
checking PKG_LIBS... -L/opt/gnome/lib -lglib-2.0
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking /usr/include/unistd.h usability... yes
checking /usr/include/unistd.h presence... yes
checking for /usr/include/unistd.h... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c clear.c -o clear.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c compare.c -o compare.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c copy.c -o copy.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c gen_uuid.c -o gen_uuid.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c isnull.c -o isnull.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c pack.c -o pack.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c parse.c -o parse.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c Rinit.c -o Rinit.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c Ruuid.c -o Ruuid.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c unpack.c -o unpack.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c unparse.c -o unparse.o
gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -I/opt/gnome/include/glib-2.0 -I/opt/gnome/lib/glib-2.0/include -DHAVE_UNISTD_H=1 -fpic -g -O2 -Wall -c uuid_time.c -o uuid_time.o
gcc -std=gnu99 -shared -L/usr/local/lib -o Ruuid.so clear.o compare.o copy.o gen_uuid.o isnull.o pack.o parse.o Rinit.o Ruuid.o unpack.o unparse.o uuid_time.o -L/opt/gnome/lib -lglib-2.0 -L/loc/biocbuild/bbs-2.1-bioc/R/lib -lR
** R
** inst
** preparing package for lazy loading
** help
>>> Building/Updating help pages for package 'Ruuid'
Formats: text html latex example
Ruuid-class text html latex example
getuuid text html latex example
uuidt-class text html latex example
** building package indices ...
* DONE (Ruuid)