Package: OrderedList

Version: 1.10.0

Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check OrderedList_1.10.0.tar.gz

RetCode: 0

Time: 252.9 seconds

Status: OK

CheckDir: OrderedList.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.1-bioc/meat/OrderedList.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'OrderedList/DESCRIPTION' ... OK
* this is package 'OrderedList' version '1.10.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'OrderedList' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating OrderedList-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating OrderedList-manual.tex ... OK
* checking OrderedList-manual.tex ... OK

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/OrderedList.Rcheck


---------- Making package OrderedList ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  preparing package OrderedList for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: twilight
Loading required package: splines
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'OrderedList'
     Formats: text html latex example chm 
  OL.data                           text    html    latex           chm
  OL.result                         text    html    latex   example chm
  OrderedList                       text    html    latex   example chm
  check.test.args                   text    html    latex           chm
  compareLists                      text    html    latex   example chm
  getOverlap                        text    html    latex   example chm
  overlap                           text    html    latex           chm
  plot.OrderedList                  text    html    latex   example chm
  prepareData                       text    html    latex   example chm
  preparePermutations               text    html    latex           chm
  print.OrderedList                 text    html    latex   example chm
  scoreOrderComparison              text    html    latex           chm
  scoreRankings                     text    html    latex           chm
  shuffledRandomScores              text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.1-bioc\meat\OrderedList.Rcheck\00_pkg_src\OrderedList\chm\OrderedList.chm


Compile time: 0 minutes, 0 seconds
15	Topics
55	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.1-bioc\meat\OrderedList.Rcheck\00_pkg_src\OrderedList\chm\OrderedList.chm, 40,210 bytes
Compression decreased file by 23,059 bytes.
  adding MD5 sums

* DONE (OrderedList)