Package: AffyExpress

Version: 1.2.0

Command: E:\biocbld\bbs-2.1-bioc\R\bin\R.exe CMD check AffyExpress_1.2.0.tar.gz

RetCode: 0

Time: 253.4 seconds

Status: OK

CheckDir: AffyExpress.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory 'E:/biocbld/bbs-2.1-bioc/meat/AffyExpress.Rcheck'
* using R version 2.6.0 (2007-10-03)
* checking for file 'AffyExpress/DESCRIPTION' ... OK
* this is package 'AffyExpress' version '1.2.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'AffyExpress' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the name space can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating AffyExpress-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating AffyExpress-manual.tex ... OK
* checking AffyExpress-manual.tex ... OK

installing R.css in E:/biocbld/bbs-2.1-bioc/meat/AffyExpress.Rcheck


---------- Making package AffyExpress ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'AffyExpress'
     Formats: text html latex example chm 
  AffyInteraction                   text    html    latex   example chm
  AffyQA                            text    html    latex   example chm
  AffyRegress                       text    html    latex   example chm
  Filter                            text    html    latex   example chm
  interaction.result2html           text    html    latex   example chm
  make.contrast                     text    html    latex   example chm
  make.design                       text    html    latex   example chm
  post.interaction                  text    html    latex   example chm
  pre.process                       text    html    latex   example chm
  regress                           text    html    latex   example chm
  result2html                       text    html    latex   example chm
  select.sig.gene                   text    html    latex   example chm
  testData                          text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702

Compiling e:\biocbld\bbs-2.1-bioc\meat\AffyExpress.Rcheck\00_pkg_src\AffyExpress\chm\AffyExpress.chm


Compile time: 0 minutes, 0 seconds
14	Topics
28	Local links
0	Internet links
1	Graphic


Created e:\biocbld\bbs-2.1-bioc\meat\AffyExpress.Rcheck\00_pkg_src\AffyExpress\chm\AffyExpress.chm, 32,548 bytes
Compression decreased file by 17,318 bytes.
  adding MD5 sums

* DONE (AffyExpress)