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| NOTES: (1) a maintainance reboot of lemming prevented these builds to complete on this machine (2) these are the last builds with R 2.6.0 (2007-06-03 r41797) on lamb1 and lemming, next builds will be with R 2.6.0 (2007-06-10 r41908) configured with --enable-strict-barrier |
| Package 169/238 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
plgem1.9.0Mattia PelizzolaLast Changed Date: 2007-04-24 11:31:42 -0700 Last Changed Rev: 24217 | lamb1 | Linux (SUSE 10.1) | x86_64 | ERROR | skipped | |
| wellington | Linux (SUSE 9.2) | i686 | ERROR | skipped | ||
| churchill | Solaris 2.9 | sparc | [ ERROR ] | skipped | ||
| lemming | Windows Server 2003 (32-bit) | x64 | ERROR | skipped | skipped |
| Package: plgem |
| Version: 1.9.0 |
| Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD build plgem |
| RetCode: 1 |
| Time: 10.1 seconds |
| Status: ERROR |
| PackageFile: None |
* checking for file 'plgem/DESCRIPTION' ... OK
* preparing 'plgem':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* Installing *source* package 'plgem' ...
** R
** data
** inst
** help
>>> Building/Updating help pages for package 'plgem'
Formats: text html latex example
LPSeset text html latex example
plgem.deg text html latex example
plgem.fit text html latex example
plgem.obsStn text html latex example
run.plgem text html latex example
** building package indices ...
* DONE (plgem)
* creating vignettes ... ERROR
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Loading required package: MASS
Error: processing vignette 'plgem.Rnw' failed with diagnostics:
chunk 1 (label=PLGEMwrapper)
Error in run.plgem(esdata = LPSeset) :
At least 2 conditions are needed in object esdata for function run.plgem
Execution halted