Package: gcrma

Version: 2.8.0

Command: D:\biocbld\bbs-2.0-bioc\R\bin\R.exe CMD build gcrma

RetCode: 0

Time: 23.0 seconds

Status: OK

PackageFile: gcrma_2.8.0.tar.gz

* checking for file 'gcrma/DESCRIPTION' ... OK
* preparing 'gcrma':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
installing R.css in D:/biocbld/bbs-2.0-bioc/tmpdir/Rinst323226577


---------- Making package gcrma ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making baseProfile.d from baseProfile.c
making computeAffinities.d from computeAffinities.c
making postmean.d from postmean.c
gcc   -Id:/biocbld/bbs-2.0-bioc/R/include  -Wall -O3 -std=gnu99   -c baseProfile.c -o baseProfile.o
baseProfile.c: In function `gcrma_getSeq2':
baseProfile.c:14: warning: unused variable `nx'
gcc   -Id:/biocbld/bbs-2.0-bioc/R/include  -Wall -O3 -std=gnu99   -c computeAffinities.c -o computeAffinities.o
gcc   -Id:/biocbld/bbs-2.0-bioc/R/include  -Wall -O3 -std=gnu99   -c postmean.c -o postmean.o
windres -I d:/biocbld/bbs-2.0-bioc/R/include  -i gcrma_res.rc -o gcrma_res.o
gcc  -shared -s  -o gcrma.dll gcrma.def baseProfile.o computeAffinities.o postmean.o gcrma_res.o  -Ld:/biocbld/bbs-2.0-bioc/R/bin    -lR
  ... DLL made
  installing DLL
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'gcrma'
     Formats: text html latex example chm 
  affinity.spline.coefs             text    html    latex           chm
  bg.adjust.affinities              text    html    latex           chm
  bg.adjust.gcrma                   text    html    latex   example chm
  bg.parameters.ns                  text    html    latex           chm
  compute.affinities                text    html    latex           chm
  fast.bkg                          text    html    latex           chm
  gcrma                             text    html    latex   example chm
  gcrma.engine                      text    html    latex   example chm
  gcrma.engine2                     text    html    latex   example chm
  getCDF                            text    html    latex           chm
  justGCRMA                         text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\bbs-2.0-bioc\meat\gcrma\chm\gcrma.chm





Compile time: 0 minutes, 0 seconds

12	Topics

45	Local links

0	Internet links

1	Graphic





Created d:\biocbld\bbs-2.0-bioc\meat\gcrma\chm\gcrma.chm, 32,274 bytes

Compression decreased file by 23,594 bytes.

  preparing package gcrma for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affy
Loading required package: affyio
Loading required package: matchprobes
Loading required package: splines
  adding MD5 sums

* DONE (gcrma)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'gcrma_2.8.0.tar.gz'