* checking for file 'maanova/DESCRIPTION' ... OK
* preparing 'maanova':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'maanova' ...
** libs
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fpic -g -O2 -std=gnu99 -Wall -c makeratio.c -o makeratio.o
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fpic -g -O2 -std=gnu99 -Wall -c shift.c -o shift.o
shift.c: In function `shift':
shift.c:27: warning: unused variable `k'
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fpic -g -O2 -std=gnu99 -Wall -c util.c -o util.o
gcc -shared -L/usr/local/lib -o maanova.so makeratio.o shift.o util.o
** R
** data
** demo
** inst
** preparing package for lazy loading
** help
>>> Building/Updating help pages for package 'maanova'
Formats: text html latex example
Rmaanova.version text html latex example
abf1 text html latex example
adjPval text html latex example
arrayview text html latex example
consensus text html latex example
createData text html latex example
dyeswapfilter text html latex example
exprSet2Rawdata text html latex
fill.missing text html latex example
fitmaanova text html latex example
fom text html latex example
geneprofile text html latex example
gridcheck text html latex example
kidney text html latex example
maanova-internal text html latex example
macluster text html latex example
makeModel text html latex example
matest text html latex example
paigen text html latex example
read.madata text html latex example
resiplot text html latex example
riplot text html latex example
subset.madata text html latex example
transform.madata text html latex example
varplot text html latex example
volcano text html latex example
write.madata text html latex example
** building package indices ...
* DONE (maanova)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
file 'maanova/src/util.h' had CRLF line endings
* checking for empty or unneeded directories
* building 'maanova_1.4.0.tar.gz'