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Package 15/188 | OS | Arch | BUILD | CHECK | BUILD BIN |
annaffy1.6.0Colin A. Smith | Linux (SUSE 9.2) | x86_64 | OK | OK | |
Linux (SUSE 9.2) | i686 | OK | OK | ||
Solaris 2.9 | sparc | OK | OK | ||
Windows Server 2003 | x86_64 | OK | [ OK ] | OK |
Package: annaffy |
Version: 1.6.0 |
Command: D:\biocbld\1.9d\R\bin\R.exe CMD check annaffy_1.6.0.tar.gz |
RetCode: 0 |
Time: 685.7 seconds |
Status: OK |
CheckDir: annaffy.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory 'D:/biocbld/1.9d/Rpacks/annaffy.Rcheck' * using R version 2.4.0 (2006-10-03) * checking for file 'annaffy/DESCRIPTION' ... OK * this is package 'annaffy' version '1.6.0' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'annaffy' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for non-ASCII characters ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the name space can be loaded with stated dependencies ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating annaffy-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating annaffy-manual.tex ... OK * checking annaffy-manual.tex ... OK
annaffy.Rcheck/00install.out:
installing R.css in D:/biocbld/1.9d/Rpacks/annaffy.Rcheck ---------- Making package annaffy ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata installing R files save image Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()' or start with 'help(Biobase)'. For details on reading vignettes, see the openVignette help page. Loading required package: GO Loading required package: KEGG installing inst files installing data files installing man source files installing indices not zipping data installing help >>> Building/Updating help pages for package 'annaffy' Formats: text html latex example chm aaf.character text html latex chm aaf.goterm text html latex chm aaf.handler text html latex chm aaf.integer text html latex chm aaf.raw text html latex chm aafChromLoc-class text html latex chm aafChromLoc text html latex example chm aafChromosome-class text html latex chm aafChromosome text html latex example chm aafCytoband-class text html latex chm aafCytoband text html latex example chm aafDescription-class text html latex chm aafDescription text html latex example chm aafExpr text html latex chm aafFunction-class text html latex chm aafFunction text html latex example chm aafGO-class text html latex chm aafGO text html latex example chm aafGOItem-class text html latex chm aafGenBank-class text html latex chm aafGenBank text html latex example chm aafIntensity-class text html latex chm aafList-class text html latex chm aafLocusLink-class text html latex chm aafLocusLink text html latex example chm aafPathway-class text html latex chm aafPathway text html latex example chm aafPathwayItem-class text html latex chm aafProbe-class text html latex chm aafProbe text html latex example chm aafPubMed-class text html latex chm aafPubMed text html latex example chm aafSearchGO text html latex chm aafSearchText text html latex example chm aafSigned-class text html latex chm aafSymbol-class text html latex chm aafSymbol text html latex example chm aafTable-class text html latex chm aafTable text html latex chm aafTableAnn text html latex chm aafTableFrame text html latex chm aafTableInt text html latex chm aafUniGene-class text html latex chm aafUniGene text html latex example chm chkPkgs text html latex chm getCSS-methods text html latex chm getHTML-methods text html latex chm getTD-methods text html latex chm getText-methods text html latex chm getURL-methods text html latex chm is.annpkg text html latex example chm selectorWidget text html latex chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\biocbld\1.9d\Rpacks\annaffy.Rcheck\00_pkg_src\annaffy\chm\annaffy.chm Compile time: 0 minutes, 0 seconds 53 Topics 306 Local links 5 Internet links 1 Graphic Created d:\biocbld\1.9d\Rpacks\annaffy.Rcheck\00_pkg_src\annaffy\chm\annaffy.chm, 47,396 bytes Compression decreased file by 101,296 bytes. adding MD5 sums * DONE (annaffy)