* checking for file 'DEDS/DESCRIPTION' ... OK
* preparing 'DEDS':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'DEDS' ...
** libs
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c deds.c -o deds.o
deds.c: In function 'type2stat':
deds.c:451: warning: 'test' may be used uninitialized in this function
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c distance.c -o distance.o
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c input.c -o input.o
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c manip.c -o manip.o
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c random.c -o random.o
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c sampling.c -o sampling.o
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c stat_fun.c -o stat_fun.o
stat_fun.c: In function 'tmixture':
stat_fun.c:1083: warning: statement with no effect
stat_fun.c:1083: warning: 'res' is used uninitialized in this function
gcc -G -L/usr/local/lib -o DEDS.so deds.o distance.o input.o manip.o random.o sampling.o stat_fun.o
** R
** data
** inst
** preparing package for lazy loading
** help
>>> Building/Updating help pages for package 'DEDS'
Formats: text html latex example
ApoA1 text html latex
DEDS-internal text html latex
affySpikeIn text html latex
aggregateFun text html latex example
comp.B text html latex example
comp.F text html latex example
comp.FC text html latex example
comp.SAM text html latex example
comp.adjp text html latex example
comp.ebayes text html latex example
comp.fdr text html latex example
comp.modF text html latex example
comp.modt text html latex example
comp.stat text html latex example
comp.t text html latex example
comp.unadjp text html latex example
deds.chooseTest text html latex example
deds.class text html latex
deds.genExtra text html latex example
deds.pval text html latex example
deds.stat text html latex example
deds.stat.linkC text html latex example
hist.DEDS text html latex example
pairs.DEDS text html latex example
qqnorm.DEDS text html latex example
topgenes text html latex example
** building package indices ...
* DONE (DEDS)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'DEDS_1.6.0.tar.gz'