Package: SBMLR

Version: 1.27.0

Command: D:\biocbld\1.9d\R\bin\R.exe CMD check SBMLR_1.27.0.tar.gz

RetCode: 0

Time: 75.9 seconds

Status: WARNINGS

CheckDir: SBMLR.Rcheck

Warnings: 1

* checking for working latex ... OK
* using log directory 'D:/biocbld/1.9d/Rpacks/SBMLR.Rcheck'
* using R version 2.4.0 alpha (2006-09-10 r39242)
* checking for file 'SBMLR/DESCRIPTION' ... OK
* this is package 'SBMLR' version '1.27.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'SBMLR' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... WARNING
Loading required package: XML

Loading required package: methods

Error in paste(normalizePath(file.path(libname, pkgname, "libs")), file.path(Sys.getenv("R_HOME"),  : 
	could not find function "normalizePath"
Error: .onLoad failed in 'loadNamespace' for 'XML'
Error: package 'XML' could not be loaded
Execution halted

It looks like this package (or one of its dependent packages) has an
unstated dependence on a standard package.  All dependencies must be
declared in DESCRIPTION.
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating SBMLR-Ex.R ... OK
* checking examples ... OK
* creating SBMLR-manual.tex ... OK
* checking SBMLR-manual.tex ... OK

WARNING: There was 1 warning, see
  D:/biocbld/1.9d/Rpacks/SBMLR.Rcheck/00check.log
for details

installing R.css in D:/biocbld/1.9d/Rpacks/SBMLR.Rcheck


---------- Making package SBMLR ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'SBMLR'
     Formats: text html latex example chm 
  equateModels                      text    html    latex   example chm
  makeLaw                           text    html    latex   example chm
  readSBML                          text    html    latex   example chm
  readSBMLR                         text    html    latex   example chm
  saveSBML                          text    html    latex   example chm
  saveSBMLR                         text    html    latex   example chm
  simulate                          text    html    latex   example chm
  summary.SBML                      text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\1.9d\Rpacks\SBMLR.Rcheck\00_pkg_src\SBMLR\chm\SBMLR.chm


Compile time: 0 minutes, 0 seconds
9	Topics
22	Local links
0	Internet links
1	Graphic


Created d:\biocbld\1.9d\Rpacks\SBMLR.Rcheck\00_pkg_src\SBMLR\chm\SBMLR.chm, 24,984 bytes
Compression decreased file by 3,047 bytes.
  preparing package SBMLR for lazy loading
Loading required package: XML

Loading required package: odesolve

  adding MD5 sums

* DONE (SBMLR)