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Package 171/205OSArchBUILDCHECKBUILD BIN

Ruuid

1.11.2

Biocore Team
Linux (SUSE 9.2) x86_64 OK  WARNINGS 
Linux (SUSE 9.2) i686 OK  WARNINGS 
Solaris 2.9 sparc OK  OK 
Linux (SUSE 10.0) x86_64 OK  WARNINGS 
Windows Server 2003 x86_64 OK [ WARNINGS ] OK 
Windows XP i686 OK  WARNINGS skipped
Mac OS X (10.4.6) i686 OK  WARNINGS 
Package: Ruuid
Version: 1.11.2
Command: D:\biocbld\1.9d\R\bin\R.exe CMD check Ruuid_1.11.2.tar.gz
RetCode: 0
Time: 73.5 seconds
Status: WARNINGS
CheckDir: Ruuid.Rcheck
Warnings: 2

Command output

* checking for working latex ... OK
* using log directory 'D:/biocbld/1.9d/Rpacks/Ruuid.Rcheck'
* using R version 2.4.0 alpha (2006-09-10 r39242)
* checking for file 'Ruuid/DESCRIPTION' ... OK
* this is package 'Ruuid' version '1.11.2'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'Ruuid' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for non-ASCII characters ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... WARNING
Loading required package: methods

Error in inherits(x, "factor") : could not find function "installed.packages"
Error: .onLoad failed in 'loadNamespace' for 'Ruuid'
Error: package/namespace load failed for 'Ruuid'
Execution halted

It looks like this package (or one of its dependent packages) has an
unstated dependence on a standard package.  All dependencies must be
declared in DESCRIPTION.
See the information on DESCRIPTION files in the chapter 'Creating R
packages' of the 'Writing R Extensions' manual.
* checking whether the name space can be loaded with stated dependencies ... WARNING
Error in .asEnvironmentPackage(where) : Package 'methods' is not loaded
Error: unable to load R code in package 'Ruuid'
Execution halted

A namespace must be able to be loaded with just the base namespace loaded:
otherwise if the namespace gets loaded by a saved object, the session will
be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking for CRLF line endings in C/C++/Fortran sources/headers ... OK
* checking for portable compilation flags in Makevars ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating Ruuid-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating Ruuid-manual.tex ... OK
* checking Ruuid-manual.tex ... OK

WARNING: There were 2 warnings, see
  D:/biocbld/1.9d/Rpacks/Ruuid.Rcheck/00check.log
for details

Ruuid.Rcheck/00install.out:

installing R.css in D:/biocbld/1.9d/Rpacks/Ruuid.Rcheck


---------- Making package Ruuid ------------

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************

  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  running src/Makefile.win ...
gcc  -Id:/biocbld/1.9d/R/src/include -O2 -DWin32  -c Ruuid.c -o Ruuid.o
Ruuid.c: In function `UUID2uuidt':
Ruuid.c:33: warning: passing arg 2 of `uuid_pack' from incompatible pointer type
gcc  -Id:/biocbld/1.9d/R/src/include -O2 -DWin32  -c pack.c -o pack.o
gcc  -Id:/biocbld/1.9d/R/src/include -O2 -DWin32  -c parse.c -o parse.o
gcc  -Id:/biocbld/1.9d/R/src/include -O2 -DWin32  -c Rinit.c -o Rinit.o
gcc  -Id:/biocbld/1.9d/R/src/include -O2 -DWin32  -c unpack.c -o unpack.o
gcc  -Id:/biocbld/1.9d/R/src/include -O2 -DWin32  -c unparse.c -o unparse.o
rm -f -f Ruuid.a
ar cr Ruuid.a *.o
ranlib Ruuid.a
gcc  -shared   -o Ruuid.dll Ruuid.def Ruuid.a  -Ld:/biocbld/1.9d/R/bin -lrpcrt4 -lg2c -lRblas -lR
  ... done
  installing DLL
  installing R files
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'Ruuid'
     Formats: text html latex example chm 
  Ruuid-class                       text    html    latex   example chm
  getuuid                           text    html    latex   example chm
  uuidt-class                       text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702

Compiling d:\biocbld\1.9d\Rpacks\Ruuid.Rcheck\00_pkg_src\Ruuid\chm\Ruuid.chm


Compile time: 0 minutes, 0 seconds
4	Topics
24	Local links
3	Internet links
1	Graphic


Created d:\biocbld\1.9d\Rpacks\Ruuid.Rcheck\00_pkg_src\Ruuid\chm\Ruuid.chm, 18,550 bytes
Compression increased file by 2,268 bytes.
  adding MD5 sums

* DONE (Ruuid)