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Package 3/205OSArchBUILDCHECKBUILD BIN

adSplit

1.3.2

Claudio Lottaz		Linux (SUSE 9.2) x86_64[ ERROR ]skipped
Linux (SUSE 9.2) i686 ERROR skipped
Solaris 2.9 sparc ERROR skipped
Linux (SUSE 10.0) x86_64 ERROR skipped
Windows Server 2003 x86_64 ERROR skippedskipped
Windows XP i686 ERROR skippedskipped
Mac OS X (10.4.6) i686 ERROR skipped
Package: adSplit
Version: 1.3.2
Command: /loc/biocbuild/1.9d/R/bin/R CMD build adSplit
RetCode: 1
Time: 17.6 seconds
Status: ERROR
PackageFile: None

Command output

* checking for file 'adSplit/DESCRIPTION' ... OK
* preparing 'adSplit':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'adSplit' ...
** libs
g++ -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include  -I/usr/local/include    -fpic  -g -O2 -Wall -c adSplit.cpp -o adSplit.o
g++ -shared -L/usr/local/lib64 -o adSplit.so adSplit.o   
** R
** data
** inst
** save image
Loading required package: cluster

Loading required package: multtest

Loading required package: Biobase

Loading required package: tools


Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: survival

Loading required package: splines

Loading required package: affy

Loading required package: affyio

Loading required package: GO

Loading required package: KEGG

** help
 >>> Building/Updating help pages for package 'adSplit'
     Formats: text html latex example 
  adSplit-internal                  text    html    latex
  adSplit                           text    html    latex   example
  diana2means                       text    html    latex   example
  drawRandomPS                      text    html    latex   example
  golubKEGGSplits                   text    html    latex   example
  hist.splitSet                     text    html    latex   example
  image.splitSet                    text    html    latex   example
  makeEID2PROBESenv                 text    html    latex   example
  print.split                       text    html    latex
  print.splitSet                    text    html    latex   example
  randomDiana2means                 text    html    latex   example
** building package indices ...
* DONE (adSplit)
* creating vignettes ... ERROR
Loading required package: Biobase


Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: cluster

Loading required package: multtest

Loading required package: survival

Loading required package: splines

Loading required package: affy

Loading required package: affyio

Loading required package: GO

Loading required package: KEGG


Error:  chunk 2 
Error: package/namespace load failed for 'adSplit'
Error in buildVignettes(dir = ".") : Error:  chunk 2 
Error: package/namespace load failed for 'adSplit'
Execution halted