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Package 177/187 | OS | Arch | BUILD | CHECK | BUILD BIN |
tilingArray1.11.3W. Huber | Linux (SUSE 9.2) | x86_64 | OK | OK | |
Linux (SUSE 9.2) | i686 | OK | OK | ||
Solaris 2.9 | sparc | ERROR | skipped | ||
Linux (SUSE 10.0) | x86_64 | OK | OK | ||
Windows Server 2003 | x86_64 | OK | [ WARNINGS ] | OK |
Package: tilingArray |
Version: 1.11.3 |
Command: D:\biocbld\1.9d\R\bin\R.exe CMD check tilingArray_1.11.3.tar.gz |
RetCode: 0 |
Time: 118.4 seconds |
Status: WARNINGS |
CheckDir: tilingArray.Rcheck |
Warnings: 1 |
* checking for working latex ... OK * using log directory 'D:/biocbld/1.9d/Rpacks/tilingArray.Rcheck' * using R version 2.4.0 Under development (unstable) (2006-06-04 r38279) * checking for file 'tilingArray/DESCRIPTION' ... OK * this is package 'tilingArray' version '1.11.3' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'tilingArray' can be installed ... WARNING Found the following significant warnings: missing link(s): AnnotatedDataFrame * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for non-ASCII characters ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking Rd files ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking for CRLF line endings in C/C++/Fortran sources/headers ... OK * creating tilingArray-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating tilingArray-manual.tex ... OK * checking tilingArray-manual.tex ... OK WARNING: There was 1 warning, see D:/biocbld/1.9d/Rpacks/tilingArray.Rcheck/00check.log for details
tilingArray.Rcheck/00install.out:
installing R.css in D:/biocbld/1.9d/Rpacks/tilingArray.Rcheck ---------- Making package tilingArray ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata making DLL ... making findsegments.d from findsegments.c making sampleStep.d from sampleStep.c gcc -Id:/biocbld/1.9d/R/include -Wall -O2 -c findsegments.c -o findsegments.o gcc -Id:/biocbld/1.9d/R/include -Wall -O2 -c sampleStep.c -o sampleStep.o windres --include-dir d:/biocbld/1.9d/R/include -i tilingArray_res.rc -o tilingArray_res.o gcc -shared -s -o tilingArray.dll tilingArray.def findsegments.o sampleStep.o tilingArray_res.o -Ld:/biocbld/1.9d/R/bin -lR ... DLL made installing DLL installing R files save image Loading required package: Biobase Loading required package: tools Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()' or start with 'help(Biobase)'. For details on reading vignettes, see the openVignette help page. Loading required package: affy Loading required package: affyio Loading required package: RColorBrewer Loading required package: grid Loading required package: strucchange Loading required package: zoo Loading required package: sandwich Loading required package: colorspace Creating a new generic function for 'plot' in 'colorspace' Attaching package: 'colorspace' The following object(s) are masked from package:grDevices : hcl Loading required package: vsn Loading required package: genefilter Loading required package: survival Loading required package: splines Loading required package: geneplotter Loading required package: annotate KernSmooth 2.22 installed Copyright M. P. Wand 1997 Warning message: found an S4 version of 'barplot' so it has not been imported correctly installing inst files installing man source files installing indices installing help >>> Building/Updating help pages for package 'tilingArray' Formats: text html latex example chm breakpointsPretend text html latex chm class-segmentation text html latex example chm comparisonPlot text html latex example chm costMatrix text html latex example chm findsegments text html latex example chm normalizeByReference text html latex example chm otherStrand text html latex example chm plotAlongChrom text html latex example chm posMin text html latex example chm readCel2eSet text html latex example chm missing link(s): AnnotatedDataFrame sampleStep text html latex example chm segment text html latex example chm tilingArray-package text html latex chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\biocbld\1.9d\Rpacks\tilingArray.Rcheck\00_pkg_src\tilingArray\chm\tilingArray.chm Compile time: 0 minutes, 0 seconds 14 Topics 44 Local links 2 Internet links 1 Graphic Created d:\biocbld\1.9d\Rpacks\tilingArray.Rcheck\00_pkg_src\tilingArray\chm\tilingArray.chm, 39,479 bytes Compression decreased file by 17,394 bytes. adding MD5 sums * DONE (tilingArray)