Package: matchprobes

Version: 1.5.0

Command: /loc/biocbuild/1.9d/R/bin/R CMD build matchprobes

RetCode: 1

Time: 14.2 seconds

Status: ERROR

PackageFile: None

* checking for file 'matchprobes/DESCRIPTION' ... OK
* preparing 'matchprobes':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'matchprobes' ...
** libs
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include  -I/usr/local/include   -fPIC  -g -O2 -std=gnu99 -Wall -c main.c -o main.o
gcc -I/loc/biocbuild/1.9d/R/include -I/loc/biocbuild/1.9d/R/include  -I/usr/local/include   -fPIC  -g -O2 -std=gnu99 -Wall -c strutils.c -o strutils.o
gcc -G -L/usr/local/lib -o matchprobes.so main.o strutils.o   
** R
** data
** inst
** save image
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: affy
Loading required package: affyio
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
	unable to load shared library '/loc/biocbuild/1.9d/R/library/affy/libs/affy.so':
  ld.so.1: /loc/biocbuild/1.9d/R/bin/exec/R: fatal: relocation error: file /loc/biocbuild/1.9d/R/library/affy/libs/affy.so: symbol nearbyint: referenced symbol not found
Error: package 'affy' could not be loaded
Execution halted
cat: write error: Broken pipe
ERROR: execution of package source for 'matchprobes' failed
** Removing '/tmp/Rinst1711225518/matchprobes'
 ERROR
Installation failed.
Removing '/tmp/Rinst1711225518'