Package: KEGGSOAP

Version: 1.6.0

Command: /home/biocbuild/1.8d/R/bin/R CMD check KEGGSOAP_1.6.0.tar.gz

RetCode: 0

Time: 89.0 seconds

Status: OK

CheckDir: KEGGSOAP.Rcheck

Warnings: 0

* checking for working latex ... OK
* using log directory '/home/biocbuild/1.8d/Rpacks/KEGGSOAP.Rcheck'
* using Version 2.3.1 (2006-06-01)
* checking for file 'KEGGSOAP/DESCRIPTION' ... OK
* this is package 'KEGGSOAP' version '1.6.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'KEGGSOAP' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for syntax errors ... OK
* checking R files for library.dynam ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking Rd files ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* creating KEGGSOAP-Ex.R ... OK
* checking examples ... OK
* creating KEGGSOAP-manual.tex ... OK
* checking KEGGSOAP-manual.tex ... OK

* Installing *source* package 'KEGGSOAP' ...
** R
** preparing package for lazy loading
Loading required package: XML
Loading required package: SSOAP
Loading required package: RCurl
Loading required package: RCurl
** help
 >>> Building/Updating help pages for package 'KEGGSOAP'
     Formats: text html latex example 
  KEGGserver                        text    html    latex
  get.genes.by.motifs               text    html    latex   example
  get.genes.by.organism             text    html    latex   example
  get.genes.by.pathway              text    html    latex   example
  get.motifs.by.gene                text    html    latex   example
  get.paralogs.by.gene              text    html    latex   example
  get.pathways.by.genes             text    html    latex   example
  getBestNeighbors                  text    html    latex   example
  list.organisms                    text    html    latex   example
  mark.pathway.by.objects           text    html    latex   example
** building package indices ...
* DONE (KEGGSOAP)