Rgraphviz
This is the development version of Rgraphviz; for the stable release version, see Rgraphviz.
Provides plotting capabilities for R graph objects
Bioconductor version: Development (3.23)
Interfaces R with the AT and T graphviz library for plotting R graph objects from the graph package.
Author: Kasper Daniel Hansen [cre, aut], Jeff Gentry [aut], Li Long [aut], Robert Gentleman [aut], Seth Falcon [aut], Florian Hahne [aut], Deepayan Sarkar [aut]
Maintainer: Kasper Daniel Hansen <kasperdanielhansen at gmail.com>
citation("Rgraphviz")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("Rgraphviz")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Rgraphviz")| A New Interface to Plot Graphs Using Rgraphviz | R Script | |
| How To Plot A Graph Using Rgraphviz | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | GraphAndNetwork, Software, Visualization |
| Version | 2.55.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 20.5 years) |
| License | EPL |
| Depends | R (>= 2.6.0), methods, utils, graph, grid |
| Imports | stats4, graphics, grDevices |
| System Requirements | optionally Graphviz (>= 2.16), USE_C17 |
| URL |
See More
| Suggests | RUnit, BiocGenerics, XML |
| Linking To | |
| Enhances | |
| Depends On Me | BioMVCClass, CellNOptR, netresponse, paircompviz, maEndToEnd, dlsem, gridGraphviz |
| Imports Me | EnrichDO, GeneNetworkBuilder, hyperdraw, mnem, OncoSimulR, paircompviz, TRONCO, abn, agena.ai, BCDAG, BiDAG, bnpa, bnRep, ceg, CePa, classGraph, cogmapr, graphpcor, ontologyPlot, SEMgraph, stablespec, WayFindR |
| Suggests Me | CNORfeeder, CNORfuzzy, flowCore, RBGL, rBiopaxParser, SRAdb, NCIgraphData, SNAData, arulesViz, BayesNetBP, bnlearn, bnstruct, bsub, ChoR, CodeDepends, gbutils, GeneNet, HEMDAG, iTOP, kst, lava, loon, maGUI, micd, multiplex, netmeta, ParallelPC, pcalg, pchc, pks, psych, relations, rEMM, rPref, rSpectral, SCCI, sisal, textplot, tm, topologyGSA, tpc, unifDAG, zenplots |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | Rgraphviz_2.55.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/Rgraphviz |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Rgraphviz |
| Bioc Package Browser | https://code.bioconductor.org/browse/Rgraphviz/ |
| Package Short Url | https://bioconductor.org/packages/Rgraphviz/ |
| Package Downloads Report | Download Stats |