flowType

This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see flowType.

Phenotyping Flow Cytometry Assays


Bioconductor version: 3.7

Phenotyping Flow Cytometry Assays using multidimentional expansion of single dimentional partitions.

Author: Nima Aghaeepour, Kieran O'Neill, Adrin Jalali

Maintainer: Nima Aghaeepour <naghaeep at gmail.com>

Citation (from within R, enter citation("flowType")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowType")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowType")
flowType package PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews FlowCytometry, Software
Version 2.18.0
In Bioconductor since BioC 2.9 (R-2.14) (12.5 years)
License Artistic-2.0
Depends R (>= 2.10), Rcpp (>= 0.10.4), BH (>= 1.51.0-3)
Imports Biobase, graphics, grDevices, methods, flowCore, flowMeans, sfsmisc, rrcov, flowClust, flowMerge, stats
System Requirements
URL
See More
Suggests xtable
Linking To Rcpp, BH
Enhances
Depends On Me
Imports Me RchyOptimyx
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowType_2.18.0.tar.gz
Windows Binary flowType_2.18.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) flowType_2.18.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowType
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowType
Package Short Url https://bioconductor.org/packages/flowType/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.7 Source Archive