RPA
This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see RPA.
RPA: Robust Probabilistic Averaging for probe-level analysis
Bioconductor version: 3.6
Probabilistic analysis of probe reliability and differential gene expression on short oligonucleotide arrays. Lahti et al. "Probabilistic Analysis of Probe Reliability in Differential Gene Expression Studies with Short Oligonucleotide Arrays", TCBB/IEEE, 2011. http://doi.ieeecomputersociety.org/10.1109/TCBB.2009.38
Author: Leo Lahti <leo.lahti at iki.fi>
Maintainer: Leo Lahti <leo.lahti at iki.fi>
citation("RPA")):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RPA")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual | |
| NEWS | Text |
| LICENSE | Text |
Details
| biocViews | GeneExpression, Microarray, Preprocessing, QualityControl, Software |
| Version | 1.34.0 |
| In Bioconductor since | BioC 2.5 (R-2.10) (14.5 years) |
| License | BSD_2_clause + file LICENSE |
| Depends | R (>= 3.1.1), affy, BiocGenerics, methods, phyloseq |
| Imports | |
| System Requirements | |
| URL | https://github.com/antagomir/RPA |
| Bug Reports | https://github.com/antagomir/RPA |
See More
| Suggests | affydata, parallel |
| Linking To | |
| Enhances | |
| Depends On Me | prebs |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | RPA_1.34.0.tar.gz |
| Windows Binary | RPA_1.34.0.zip |
| Mac OS X 10.11 (El Capitan) | RPA_1.34.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/RPA |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RPA |
| Package Short Url | https://bioconductor.org/packages/RPA/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.6 | Source Archive |