mrcSinogramFETreferredCorrelation

Usage

Usage: mrcSinogramFETreferredCorrelation
Options:
    [-i[nput]            In                  (NULL      ).as(inFile              ) ] :Essential :InputFETDataFileList
    [-o[utput]           Out                 (NULL      ).as(outFile             ) ] :Essential :OutputEulerAngleDataFileList
    [-i[nput]Ref         InR                 (NULL      ).as(inFile              ) ] :Essential :InputReferenceFETDataFileList
    [-i[nput]Euler       InE                 (NULL      ).as(inFile              ) ] :Essential :InputEulerAngleDataFile
    [-n[ormalize]m[ode]  NM                  (0         ).as(Integer             ) ] :Optional  :normalizeMode
    [-o[utputList]m[ode] OM                  (2         ).as(Integer             ) ] :Optional  :outputListMode
    [-t[op]n[um]         TN                  (10        ).as(Integer             ) ] :Optional  :top number
    [-refR[ange]         RR                  (15        ).as(Integer             ) ] :Optional  :reference select Range
    [-w[eight]           WEIGHT              (NULL      ).as(inFile              ) ] :Optional  :CorrelationCalcWeight
    [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
    [-m[ode]             mode                (0         ).as(Integer             ) ] :Optional  :Mode
----- Additional Usage -----

Input EulerAngleDataFile example
file1	YOYS	-30	60	0
file2	YOYS	-53.24	10.000	0
...

normalizeMode 0 : normalize with average and SD of whole inputfile
                  references and datas will be normalize independently
              1 : for using normalized inputFETdata

outputListMode 0 : output anglelist  only top1 angle set
               1 :                   selected angle sets
               2 :                   top -tn angle sets
   option -tn,-refR are for outputListMode!=0
    -tn   : number of referenceMaps be considerd in selection
    -refR : step size when generate referenceMapSet from 3D image is recommend