mrcImageUnexpectedMassFromPDB

Usage

Usage: mrcImageUnexpectedMassFromPDB
Options:
    [-i[nput]            In                  (NULL      ).as(inFile              ) ] :Essential :InputDataFile
    [-p[dbFile]          InPDB               (NULL      ).as(inFile              ) ] :Essential :InputPDBDataFile
    [-o[utput]           Out                 (NULL      ).as(outFile             ) ] :Essential :OutputDataFile
    [-T[hres]            Thres               (0.0       ).as(Real                ) ] :Essential :ThresHold
    [-D[ata]             Data                (0.0       ).as(Real                ) ] :Essential :AssinedData
    [-M[ode]             AtomMode            (1         ).as(Integer             ) ] :Optional  :AtomMode
    [-r[adius]           radius              (3.4       ).as(Real                ) ] :Optional  :Radius
    [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
    [-m[ode]             mode                (0         ).as(Integer             ) ] :Optional  :Mode
>>> Mode:	
	0: Origin is BottomLeft.
	1: Origin is Center.(Helix)
	2: Origin is Center.(3D Single)
	3: Origin is shown by StartN.
	16: MaxIsProtein : Default: MinIsProtein
>>> Algorism
If MinIsProtein mode, 
	if density>Thres 
	then
		density := density
	else
		density := Data
	endif
>>> AtomMode 
	0: Nearest Voxel -> Data
	1: Nearest and 6-linked voxel -> Data
	2: Specified spheres(Outside) -> Data
	3: Inside of Specified spheres  -> Data
	2: Outside of Specified spheres -> Data