Package: CSSQ
Title: Chip-seq Signal Quantifier Pipeline
Version: 1.20.0
Author: Ashwath Kumar [aut], Michael Y Hu [aut], Yajun Mei [aut], Yuhong Fan [aut]
Maintainer: Fan Lab at Georgia Institute of Technology <yuhong.fan@biology.gatech.edu>
Description: This package is desgined to perform statistical analysis to
    identify statistically significant differentially bound regions between
    multiple groups of ChIP-seq dataset. 
License: Artistic-2.0
Encoding: UTF-8
biocViews: ChIPSeq, DifferentialPeakCalling, Sequencing, Normalization
Depends: SummarizedExperiment, GenomicRanges, IRanges, S4Vectors,
        rtracklayer
Imports: GenomicAlignments, GenomicFeatures, Rsamtools, ggplot2,
        grDevices, stats, utils
Suggests: BiocStyle, knitr, rmarkdown, markdown
VignetteBuilder: knitr
RoxygenNote: 7.0.0
git_url: https://git.bioconductor.org/packages/CSSQ
git_branch: RELEASE_3_21
git_last_commit: 1eeb773
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.21
Date/Publication: 2025-04-15
NeedsCompilation: no
Packaged: 2025-04-15 23:59:54 UTC; biocbuild
Built: R 4.5.0; ; 2025-04-16 14:14:07 UTC; windows
