SomaticCancerAlterations
This is the development version of SomaticCancerAlterations; for the stable release version, see SomaticCancerAlterations.
Somatic Cancer Alterations
Bioconductor version: Development (3.22)
Collection of somatic cancer alteration datasets
Author: Julian Gehring
Maintainer: Julian Gehring <jg-bioc at gmx.com>
Citation (from within R, enter
citation("SomaticCancerAlterations")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SomaticCancerAlterations")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SomaticCancerAlterations")| SomaticCancerAlterations - HTML | HTML | R Script |
| Reference Manual |
Details
| biocViews | CancerData, ExperimentData, Genome, NCI, Project1000genomes |
| Version | 1.45.0 |
| License | GPL-3 |
| Depends | R (>= 3.5.0) |
| Imports | GenomicRanges, IRanges, S4Vectors |
| System Requirements | |
| URL |
See More
| Suggests | testthat, ggbio, ggplot2, knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | SomaticSignatures |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | SomaticCancerAlterations_1.45.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/SomaticCancerAlterations |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SomaticCancerAlterations |
| Package Short Url | https://bioconductor.org/packages/SomaticCancerAlterations/ |
| Package Downloads Report | Download Stats |