OTUbase
This is the development version of OTUbase; for the stable release version, see OTUbase.
Provides structure and functions for the analysis of OTU data
Bioconductor version: Development (3.23)
Provides a platform for Operational Taxonomic Unit based analysis
Author: Daniel Beck, Matt Settles, and James A. Foster
Maintainer: Daniel Beck <danlbek at gmail.com>
Citation (from within R, enter
citation("OTUbase")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("OTUbase")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | DataImport, Sequencing, Software |
| Version | 1.59.0 |
| In Bioconductor since | BioC 2.7 (R-2.12) (15 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.9.0), methods, S4Vectors, IRanges, ShortRead(>= 1.23.15), Biobase, vegan |
| Imports | Biostrings |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/OTUbase |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/OTUbase |
| Package Short Url | https://bioconductor.org/packages/OTUbase/ |
| Package Downloads Report | Download Stats |