curatedCRCData

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see curatedCRCData.

Colorectal Cancer Gene Expression Analysis


Bioconductor version: 3.9

The curatedCRC package provides relevant functions and data for gene expression analysis in patients with colorectal cancer.

Author: Princy Parsana, Markus Riester, Curtis Huttenhower, Levi Waldron

Maintainer: Princy Parsana <princyparsana at jhu.edu>

Citation (from within R, enter citation("curatedCRCData")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("curatedCRCData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("curatedCRCData")
curatedCRCData PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews Cancer, Colorectal, ExperimentData, RNAExpressionData, TCGA
Version 2.16.0
License Artistic-2.0
Depends R (>= 2.10.0), nlme
Imports BiocGenerics
System Requirements
URL https://bitbucket.org/biobakery/curatedcrcdata
See More
Suggests survival, RUnit, metafor, genefilter, logging, sva, xtable, futile.logger, BiocStyle
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package curatedCRCData_2.16.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/curatedCRCData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/curatedCRCData
Package Short Url https://bioconductor.org/packages/curatedCRCData/
Package Downloads Report Download Stats