breastCancerVDX

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see breastCancerVDX.

Gene expression datasets published by Wang et al. [2005] and Minn et al. [2007] (VDX).


Bioconductor version: 3.9

Gene expression data from a breast cancer study published by Wang et al. in 2005 and Minn et al. in 2007, provided as an eSet.

Author: Markus Schroeder, Benjamin Haibe-Kains, Aedin Culhane, Christos Sotiriou, Gianluca Bontempi, John Quackenbush

Maintainer: Markus Schroeder <mschroed at jimmy.harvard.edu>, Benjamin Haibe-Kains <bhaibeka at jimmy.harvard.edu>

Citation (from within R, enter citation("breastCancerVDX")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("breastCancerVDX")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews BreastCancerData, CancerData, ExperimentData, GEO, Genome, Homo_sapiens_Data, LungCancerData, MicroarrayData, OneChannelData
Version 1.22.0
License Artistic-2.0
Depends R (>= 2.5.0)
Imports
System Requirements
URL http://compbio.dfci.harvard.edu/
See More
Suggests survcomp, genefu, Biobase
Linking To
Enhances
Depends On Me BAGS
Imports Me
Suggests Me AIMS, DART, genefu, MIGSA, MineICA, ToPASeq
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package breastCancerVDX_1.22.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/breastCancerVDX
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/breastCancerVDX
Package Short Url https://bioconductor.org/packages/breastCancerVDX/
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