PathNetData

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see PathNetData.

Experimental data for the PathNet package


Bioconductor version: 3.9

This package contains the data employed in the vignette of the PathNet package. These data belong to the following publication: PathNet: A tool for pathway analysis using topological information. Dutta B, Wallqvist A, and Reifman J., Source Code for Biology and Medicine 2012 Sep 24;7(1):10.

Author: Bhaskar Dutta <bhaskar.dutta at gmail.com>, Anders Wallqvist <awallqvist at bhsai.org>, and Jaques Reifman <jreifman at bhsai.org>

Maintainer: Jason B. Smith <jsmith at bhsai.org>

Citation (from within R, enter citation("PathNetData")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PathNetData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData, PathwayInteractionDatabase
Version 1.20.0
License GPL-3
Depends R (>= 1.14.0)
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me PathNet
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package PathNetData_1.20.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/PathNetData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/PathNetData
Package Short Url https://bioconductor.org/packages/PathNetData/
Package Downloads Report Download Stats