SSPA

This package is for version 3.7 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see SSPA.

General Sample Size and Power Analysis for Microarray and Next-Generation Sequencing Data

Bioconductor version: 3.7

General Sample size and power analysis for microarray and next-generation sequencing data.

Author: Maarten van Iterson

Maintainer: Maarten van Iterson <mviterson at gmail.com>

Citation (from within R, enter citation("SSPA")):

Installation

To install this package, start R (version "3.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SSPA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SSPA")

SSPA Overview	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	GeneExpression, Microarray, RNASeq, Software, StatisticalMethod
Version	2.20.0
In Bioconductor since	BioC 2.4 (R-2.9) (15 years)
License	GPL (>= 2)
Depends	R (>= 2.12), methods, qvalue, lattice, limma
Imports	graphics, stats
System Requirements
URL	http://www.humgen.nl/MicroarrayAnalysisGroup.html

Suggests	BiocStyle, genefilter, edgeR, DESeq
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	SSPA_2.20.0.tar.gz
Windows Binary	SSPA_2.20.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	SSPA_2.20.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/SSPA
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/SSPA
Package Short Url	https://bioconductor.org/packages/SSPA/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.7	Source Archive