FANTOM3and4CAGE

This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see FANTOM3and4CAGE.

CAGE data from FANTOM3 and FANTOM4 projects


Bioconductor version: 3.6

CAGE (Cap Analysis Gene Expression) data from FANTOM3 and FANTOM4 projects produced by RIKEN Omics Science Center.

Author: Vanja Haberle, Department of Biology, University of Bergen, Norway <vanja.haberle at bio.uib.no>

Maintainer: Vanja Haberle <vanja.haberle at bio.uib.no>

Citation (from within R, enter citation("FANTOM3and4CAGE")):

Installation

To install this package, start R (version "3.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("FANTOM3and4CAGE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FANTOM3and4CAGE")
FANTOM3and4CAGE PDF R Script
Reference Manual PDF

Details

biocViews ExperimentData, Tissue
Version 1.14.0
License GPL-3
Depends R (>= 2.15.0)
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me CAGEr
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package FANTOM3and4CAGE_1.14.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/FANTOM3and4CAGE
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/FANTOM3and4CAGE
Package Short Url https://bioconductor.org/packages/FANTOM3and4CAGE/
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