pdmclass
This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.6 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see pdmclass.
Classification of Microarray Samples using Penalized Discriminant Methods
Bioconductor version: 3.6
This package can be used to classify microarray data using one of three penalized regression methods; partial least squares, principal components regression, or ridge regression.
Author: James W. MacDonald, Debashis Ghosh, based in part on pls code of Mike Denham
Maintainer: James W. MacDonald <jmacdon at u.washington.edu>
citation("pdmclass")
):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("pdmclass")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("pdmclass")
pdmclass Overview | R Script | |
Reference Manual |
Details
biocViews | Classification, Software |
Version | 1.47.0 |
In Bioconductor since | BioC 1.7 (R-2.2) (18.5 years) |
License | Artistic-2.0 |
Depends | Biobase(>= 1.4.22), R (>= 1.9.0), fibroEset, mda |
Imports | |
System Requirements | |
URL |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | oneChannelGUI |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | pdmclass_1.47.0.tar.gz |
Windows Binary | |
Mac OS X 10.11 (El Capitan) | |
Source Repository | git clone https://git.bioconductor.org/packages/pdmclass |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/pdmclass |
Package Short Url | https://bioconductor.org/packages/pdmclass/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.6 | Source Archive |