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MANOR

This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see MANOR.

CGH Micro-Array NORmalization


Bioconductor version: 3.6

Importation, normalization, visualization, and quality control functions to correct identified sources of variability in array-CGH experiments.

Author: Pierre Neuvial <pierre.neuvial at genopole.cnrs.fr>, Philippe Hupe <philippe.hupe at curie.fr>

Maintainer: Pierre Neuvial <pierre.neuvial at genopole.cnrs.fr>

Citation (from within R, enter citation("MANOR")):

Installation

To install this package, start R (version "3.4") and enter: 


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MANOR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MANOR")
MANOR overview PDF R Script
Reference Manual PDF
NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews CopyNumberVariation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel
Version 1.50.0
In Bioconductor since BioC 1.7 (R-2.2) (18.5 years)
License GPL-2
Depends R (>= 2.10), GLAD
Imports GLAD, graphics, grDevices, stats, utils
System Requirements
URL http://bioinfo.curie.fr/projects/manor/index.html
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MANOR_1.50.0.tar.gz
Windows Binary MANOR_1.50.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) MANOR_1.50.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MANOR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MANOR
Package Short Url https://bioconductor.org/packages/MANOR/
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Old Source Packages for BioC 3.6 Source Archive