## ---- echo=FALSE-------------------------------------------------------------- knitr::opts_chunk$set(error=FALSE, warning=FALSE, message=FALSE) library(BiocStyle) self <- Githubpkg("ArtifactDB/alabaster.bumpy") ## ----------------------------------------------------------------------------- library(BumpyMatrix) library(S4Vectors) df <- DataFrame(x=runif(100), y=runif(100)) f <- factor(sample(letters[1:20], nrow(df), replace=TRUE), letters[1:20]) mat <- BumpyMatrix(split(df, f), c(5, 4)) ## ----------------------------------------------------------------------------- library(alabaster.bumpy) tmp <- tempfile() dir.create(tmp) meta <- stageObject(mat, tmp, "bumpy") .writeMetadata(meta, tmp) list.files(file.path(tmp, "bumpy"), recursive=TRUE) ## ----------------------------------------------------------------------------- loadObject(meta, tmp) ## ----------------------------------------------------------------------------- sessionInfo()