MANOR

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see MANOR.

CGH Micro-Array NORmalization


Bioconductor version: 3.17

Importation, normalization, visualization, and quality control functions to correct identified sources of variability in array-CGH experiments.

Author: Pierre Neuvial <pierre.neuvial at math.cnrs.fr>, Philippe Hupé <philippe.hupe at curie.fr>

Maintainer: Pierre Neuvial <pierre.neuvial at math.cnrs.fr>

Citation (from within R, enter citation("MANOR")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MANOR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MANOR")
Overview of the MANOR package HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews CopyNumberVariation, DataImport, Microarray, Normalization, Preprocessing, QualityControl, Software, TwoChannel
Version 1.72.0
In Bioconductor since BioC 1.7 (R-2.2) (18.5 years)
License GPL-2
Depends R (>= 2.10)
Imports GLAD, graphics, grDevices, stats, utils
System Requirements
URL http://bioinfo.curie.fr/projects/manor/index.html
Bug Reports https://github.com/pneuvial/MANOR/issues
See More
Suggests knitr, rmarkdown, bookdown
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MANOR_1.72.0.tar.gz
Windows Binary MANOR_1.72.0.zip
macOS Binary (x86_64) MANOR_1.72.0.tgz
macOS Binary (arm64) MANOR_1.72.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MANOR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MANOR
Bioc Package Browser https://code.bioconductor.org/browse/MANOR/
Package Short Url https://bioconductor.org/packages/MANOR/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.17 Source Archive