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AWFisher

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see AWFisher.

An R package for fast computing for adaptively weighted fisher's method


Bioconductor version: 3.15

Implementation of the adaptively weighted fisher's method, including fast p-value computing, variability index, and meta-pattern.

Author: Zhiguang Huo

Maintainer: Zhiguang Huo <zhuo at ufl.edu>

Citation (from within R, enter citation("AWFisher")):

Installation

To install this package, start R (version "4.2") and enter: 


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AWFisher")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AWFisher")
AWFisher HTML R Script
Reference Manual PDF
NEWS Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews Software, StatisticalMethod
Version 1.10.0
In Bioconductor since BioC 3.10 (R-3.6) (4.5 years)
License GPL-3
Depends R (>= 3.6)
Imports edgeR, limma, stats
System Requirements
URL
Bug Reports https://github.com/Caleb-Huo/AWFisher/issues
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Suggests knitr, tightClust
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package AWFisher_1.10.0.tar.gz
Windows Binary AWFisher_1.10.0.zip (64-bit only)
macOS Binary (x86_64) AWFisher_1.10.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/AWFisher
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/AWFisher
Bioc Package Browser https://code.bioconductor.org/browse/AWFisher/
Package Short Url https://bioconductor.org/packages/AWFisher/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.15 Source Archive