ppiData
This package is for version 3.14 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see ppiData.
A package that contains the bait to prey directed graphs for protein-protein interactions
Bioconductor version: 3.14
This package contains the directed graphs for protein interaction data as derived from Y2H and APMS. It also includes the code used to obtain the y2h data from IntAct Repository.
Author: Tony Chiang
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
citation("ppiData")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ppiData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ppiData")| ppiData: Quick Start | HTML | R Script |
| Reference Manual |
Details
| biocViews | ExperimentData |
| Version | 0.32.0 |
| License | Artistic-2.0 |
| Depends | graph |
| Imports | AnnotationDbi |
| System Requirements | |
| URL |
See More
| Suggests | org.Sc.sgd.db, ppiStats, rmarkdown, knitr, BiocStyle |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | ppiStats, ScISI |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ppiData_0.32.0.tar.gz |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Source Repository | git clone https://git.bioconductor.org/packages/ppiData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ppiData |
| Package Short Url | https://bioconductor.org/packages/ppiData/ |
| Package Downloads Report | Download Stats |