Fletcher2013b

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see Fletcher2013b.

Master regulators of FGFR2 signalling and breast cancer risk


Bioconductor version: 3.14

This package reproduces the systems biology analysis for the data in package Fletcher2013a using RTN.

Author: Mauro Castro, Michael Fletcher, Florian Markowetz and Kerstin Meyer.

Maintainer: Mauro Castro <mauro.a.castro at gmail.com>

Citation (from within R, enter citation("Fletcher2013b")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Fletcher2013b")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Fletcher2013b")
Main vignette:Fletcher2013b PDF R Script
Reference Manual PDF

Details

biocViews BreastCancerData, CancerData, ChIPSeqData, ExperimentData, SNPData
Version 1.30.0
License GPL (>= 2)
Depends R (>= 2.15), Fletcher2013a, RTN(>= 1.1.2), RedeR(>= 1.8.1), igraph
Imports RColorBrewer
System Requirements
URL http://dx.doi.org/10.1038/ncomms3464
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me geneplast, RTNsurvival
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Fletcher2013b_1.30.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/Fletcher2013b
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Fletcher2013b
Package Short Url https://bioconductor.org/packages/Fletcher2013b/
Package Downloads Report Download Stats