ChimpHumanBrainData

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see ChimpHumanBrainData.

Chimp and human brain data package


Bioconductor version: 3.14

This data package contains chimp and human brain data extracted from the ArrayExpress accession E-AFMX-2. Both human and chimp RNAs were run on human hgu95av2 Affymetrix arrays. It is a useful dataset for tutorials.

Author: Roman Jaksik, Naomi Altman, and Sean Davis

Maintainer: Sean Davis <sdavis2 at mail.nih.gov>

Citation (from within R, enter citation("ChimpHumanBrainData")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ChimpHumanBrainData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ChimpHumanBrainData")
DiffExpressVignette.pdf PDF R Script
Reference Manual PDF

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MicroarrayData, Pan_troglodytes_Data, Tissue, TissueMicroarrayData
Version 1.32.0
License MIT
Depends affy, qvalue, limma, hexbin, statmod
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ChimpHumanBrainData_1.32.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/ChimpHumanBrainData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ChimpHumanBrainData
Package Short Url https://bioconductor.org/packages/ChimpHumanBrainData/
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