synaptome.data
This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see synaptome.data.
AnnotationData for Synaptome.DB package
Bioconductor version: 3.14
The package provides access to the copy of the Synaptic proteome database. It was designed as an accompaniment for Synaptome.DB package. Database provides information for specific genes and allows building the protein-protein interaction graph for gene sets, synaptic compartments, and brain regions.
Author: Anatoly Sorokin [aut], Oksana Sorokina [aut, cre], J. Douglas Armstrong [aut]
Maintainer: Oksana Sorokina <oksana.sorokina at ed.ac.uk>
citation("synaptome.data")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("synaptome.data")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("synaptome.data")| data_vignette | HTML | R Script |
| Reference Manual |
Details
| biocViews | AnnotationData, AnnotationHub, CustomDBSchema, FunctionalAnnotation |
| Version | 0.99.3 |
| License | Artistic-2.0 |
| Depends | R (>= 3.5.0), AnnotationHub |
| Imports | |
| System Requirements | |
| URL | |
| Bug Reports | https://github.com/lptolik/synaptome.db/issues/ |
See More
| Suggests | BiocStyle, knitr, RefManageR, rmarkdown, sessioninfo |
| Linking To | |
| Enhances | |
| Depends On Me | synaptome.db |
| Imports Me | |
| Suggests Me | |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | synaptome.data_0.99.3.tar.gz |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Package Short Url | https://bioconductor.org/packages/synaptome.data/ |
| Package Downloads Report | Download Stats |