AHMeSHDbs
This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see AHMeSHDbs.
MeSHDbs for AnnotationHub
Bioconductor version: 3.14
Supplies AnnotationHub with `MeSHDb` NIH MeSH annotation databases for many species. All the SQLite files and metadata.csv are generated by our Snakemake workflow [mesh-workflow](https://github.com/rikenbit/mesh-workflow).
Author: Koki Tsuyuzaki [aut, cre], Manabu Ishii [aut], Itoshi Nikaido [aut]
Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>
citation("AHMeSHDbs")):
Installation
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("AHMeSHDbs")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("AHMeSHDbs")| Provide MeSHDb databases for AnnotationHub | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | AnnotationData, AnnotationHub, FunctionalAnnotation, MeSHDb |
| Version | 1.2.0 |
| License | Artistic-2.0 |
| Depends | R (>= 4.1.0) |
| Imports | AnnotationHub(>= 2.22.0) |
| System Requirements | |
| URL | |
| Bug Reports | https://github.com/rikenbit/AHMeSHDbs/issues |
See More
| Suggests | BiocStyle, knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | AHMeSHDbs_1.2.0.tar.gz |
| Windows Binary | |
| macOS 10.13 (High Sierra) | |
| Package Short Url | https://bioconductor.org/packages/AHMeSHDbs/ |
| Package Downloads Report | Download Stats |