EBcoexpress

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see EBcoexpress.

EBcoexpress for Differential Co-Expression Analysis


Bioconductor version: 3.14

An Empirical Bayesian Approach to Differential Co-Expression Analysis at the Gene-Pair Level

Author: John A. Dawson

Maintainer: John A. Dawson <jadawson at wisc.edu>

Citation (from within R, enter citation("EBcoexpress")):

Installation

To install this package, start R (version "4.1") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("EBcoexpress")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("EBcoexpress")
EBcoexpress Demo PDF R Script
Reference Manual PDF

Details

biocViews Bayesian, Software
Version 1.38.0
In Bioconductor since BioC 2.10 (R-2.15) (12 years)
License GPL (>= 2)
Depends EBarrays, mclust, minqa
Imports
System Requirements
URL
See More
Suggests graph, igraph, colorspace
Linking To
Enhances
Depends On Me SRGnet
Imports Me
Suggests Me dcanr
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package EBcoexpress_1.38.0.tar.gz
Windows Binary EBcoexpress_1.38.0.zip (32- & 64-bit)
macOS 10.13 (High Sierra) EBcoexpress_1.38.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/EBcoexpress
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/EBcoexpress
Bioc Package Browser https://code.bioconductor.org/browse/EBcoexpress/
Package Short Url https://bioconductor.org/packages/EBcoexpress/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.14 Source Archive