Bioconductor version: 2.6
The R Genetics Project is a collaborative effort to develop a complete set of tools for storing, accessing, manipulating, and analyzing genetics data, from small candidate-gene studies consisting of a few genetic markers to large whole-genome studies containing hundreds of thousands of markers. This package (GeneticsBase) provides a foundation of efficient data structures and easy-to-use manipulation functions.
Author: Gregory Warnes <warnes at bst.rochester.edu> Ross Lazarus <ross.lazarus at channing.harvard.edu> Scott D Chasalow <scott.chasalow at bms.com> Giovanni Montana <giovanni.montana at bms.com> Michael O'Connell <moconnell at insightful.com> Junsheng Cheng <jcheng8 at users.sourceforge.net> Nitin Jain <nitin.jain at pfizer.com>
Maintainer: The R Genetics Project <r-genetics-talk at lists.sourceforge.net>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("GeneticsBase")
To cite this package in a publication, start R and enter:
citation("GeneticsBase")
| CAMP_alleleSummary_html.pdf | ||
| CAMP_genotypeSummary_html.pdf | ||
| CAMP_LD_html.pdf | ||
| R Script | HOWTO: Load Genotype Data | |
| R Script | Summary Tables | |
| R Script | Summary Tables | |
| Reference Manual |
| biocViews | Genetics |
| Depends | R (>= 2.3.1), methods, combinat |
| Imports | gdata (>= 2.3.0), gplots (>= 2.3.1), gtools (>= 2.2.3), graphics, grDevices, methods, stats, utils, xtable |
| Suggests | GeneticsDesign, fbat |
| System Requirements | |
| License | LGPL |
| URL | |
| Depends On Me | fbat |
| Imports Me | fbat |
| Suggests Me | |
| Version | 1.14.0 |
| Since | Bioconductor 2.0 (R-2.5) |
| Package Source | GeneticsBase_1.14.0.tar.gz |
| Windows Binary | GeneticsBase_1.14.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | GeneticsBase_1.14.0.tgz |
| Package Downloads Report | Download Stats |
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