Bioconductor version: 2.5
dealing with hapmap SNP reports, GWAS, etc.
Author: Vince Carey <stvjc at channing.harvard.edu>
Maintainer: Vince Carey <stvjc at channing.harvard.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("GGtools")
To cite this package in a publication, start R and enter:
citation("GGtools")
R Script | GGtools Bioinfo Application note support | |
R Script | GGtools overview | |
Reference Manual |
biocViews | SNP, GeneticVariability, Genetics, Bioinformatics |
Depends | R (>= 2.7.0), methods, Biobase(>= 1.11.26), GGBase(>= 3.2.17), GSEABase, snpMatrix(>= 1.7.3), RColorBrewer, RSQLite, Biostrings, rpart |
Imports | AnnotationDbi, IRanges(>= 1.1.6), annaffy |
Suggests | illuminaHumanv1.db, org.Hs.eg.db, SNPlocs.Hsapiens.dbSNP.20071016, mapLD, haplo.stats |
System Requirements | |
License | Artistic-2.0 |
URL | |
Depends On Me | encoDnaseI |
Imports Me | |
Suggests Me | GGBase, hmyriB36, ind1KG |
Version | 3.4.0 |
Since | Bioconductor 1.9 (R-2.4) |
Package Source | GGtools_3.4.0.tar.gz |
Windows Binary | GGtools_3.4.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | GGtools_3.4.0.tgz |
Package Downloads Report | Download Stats |
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