2011-10-03: version 0.1.25

- Changes to the documentation and to the vignette.  New functions added and more support for gene names and strange exonids.

2011-07-12: version 0.1.11

- Parallelization possibility added to the code, with its description in the vignette and single exon genes ignored properly.

2011-07-01: version 0.1.10

- 'estimateSizeFactors' and 'estimatedispersions' function added as S4 methods, no more problems when loading DESeq and DEXSeq in the same R session

2012-05-21: version 1.3.2

- More options and flexibilty added to "estimatelog2FoldChanges"

2012-06-26: version 1.3.3

- Now any function relies on the order of the levels of the factors.