The package contains functions for exploratory oligonucleotide array analysis. The dependance to tkWidgets only concerns few convenience functions. 'affy' is fully functional without it.
| Author | Rafael A. Irizarry , Laurent Gautier , Benjamin Milo Bolstad , and Crispin Miller with contributions from Magnus Astrand , Leslie M. Cope , Robert Gentleman, Jeff Gentry, Conrad Halling , Wolfgang Huber, James MacDonald , Benjamin I. P. Rubinstein, Christopher Workman , John Zhang |
| Maintainer | Rafael A. Irizarry |
Vignettes (Documentation) |
Package Downloads |
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| biocViews | |
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| Depends | R, Biobase, methods, utils, affyio |
| Suggests | tkWidgets, affydata, geneplotter |
| Imports | |
| SystemRequirements | |
| License | LGPL version 2 or newer |
| URL | |
| dependsOnMe | adSplit, affycoretools, affydata, affylmGUI, affypdnn, affyPLM, affyQCReport, altcdfenvs, applera, beadarray, BeadExplorer, ecolitk, factDesign, gcrma, GeneTraffic, Harshlight, maDB, makecdfenv, matchprobes, mmgmos, panp, plier, simpleaffy, sscore, tilingArray, webbioc |
| suggestsMe | limma, made4, siggenes, vsn |