Clonality

Clonality testing

Bioconductor version: Development (2.8)

Statistical tests for clonality versus independence of tumors from the same patient based on their LOH or genomewide copy number profiles

Author: Irina Ostrovnaya

Maintainer: Irina Ostrovnaya

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("Clonality")    

Documentation

PDF

R Script

Clonality

Reference Manual

Details

biocViews	Microarray, CopyNumberVariants, Classification, aCGH
Depends	R, DNAcopy
Imports	DNAcopy, grDevices, graphics, stats, utils
Suggests	gdata, DNAcopy
System Requirements
License	GPL-3
URL
Depends On Me
Imports Me
Suggests Me
Version	0.99.1

Package Downloads

Package Source	Clonality_0.99.1.tar.gz
Windows Binary	Clonality_0.99.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	Clonality_0.99.1.tgz
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