############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r spicyWorkflow -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data spicyWorkflow ### ############################################################################## ############################################################################## * checking for file 'spicyWorkflow/DESCRIPTION' ... OK * preparing 'spicyWorkflow': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'spicyWorkflow.Rmd' using rmarkdown Quitting from lines 276-284 [unnamed-chunk-8] (spicyWorkflow.Rmd) Error: processing vignette 'spicyWorkflow.Rmd' failed with diagnostics: error writing to connection --- failed re-building 'spicyWorkflow.Rmd' SUMMARY: processing the following file failed: 'spicyWorkflow.Rmd' Error: Vignette re-building failed. Execution halted Error in serialize(data, node$con) : error writing to connection Calls: ... .send_to -> -> sendData.SOCKnode -> serialize