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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:OGRE.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings OGRE_1.10.0.tar.gz
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* using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/OGRE.Rcheck’
* using R version 4.4.3 (2025-02-28)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘OGRE/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘OGRE’ version ‘1.10.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘OGRE’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... ERROR
Running examples in ‘OGRE-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gvizPlot
> ### Title: Generate Gviz plot
> ### Aliases: gvizPlot
> 
> ### ** Examples
> 
> myOGRE <- makeExampleOGREDataSet()
Initializing OGREDataSet... 
> myOGRE <- loadAnnotations(myOGRE)
Reading query dataset... 
Reading subject datasets... 
> myOGRE <- fOverlaps(myOGRE)
> myOGRE <- gvizPlot(myOGRE,query="ENSG00000142168")
Plotting query: ENSG00000142168
Error in errorHandler(responseError) : Internal Server Error
Calls: gvizPlot ... doTryCatch -> <Anonymous> -> handleResponse -> errorHandler
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
   13.             └─rtracklayer::getTable(query)
   14.               └─rtracklayer (local) .local(object, ...)
   15.                 ├─restfulr::read(url$getData$track, query)
   16.                 └─restfulr::read(url$getData$track, query)
   17.                   ├─base::tryCatch(...)
   18.                   │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   19.                   │   └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   20.                   │     └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   21.                   └─x@protocol$read(x, cacheInfo)
   22.                     └─restfulr:::handleResponse(content, reader, cache.info, x@errorHandler)
   23.                       └─restfulr (local) errorHandler(responseError)
  
  [ FAIL 1 | WARN 0 | SKIP 0 | PASS 8 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 ERRORs
See
  ‘/Users/biocbuild/bbs-3.20-bioc/meat/OGRE.Rcheck/00check.log’
for details.