############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data NetPathMiner ### ############################################################################## ############################################################################## * checking for file ‘NetPathMiner/DESCRIPTION’ ... OK * preparing ‘NetPathMiner’: * checking DESCRIPTION meta-information ... OK * cleaning src * running ‘cleanup’ * installing the package to build vignettes ----------------------------------- * installing *source* package ‘NetPathMiner’ ... ** using staged installation 'config' variable 'CPP' is defunct checking for gcc... clang -arch arm64 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether clang -arch arm64 accepts -g... yes checking for clang -arch arm64 option to accept ISO C89... none needed checking how to run the C preprocessor... clang -arch arm64 -E checking for xmlParseFile in -lxml2... yes checking for readSBML in -lsbml... no Non x86_64 architecture. Using system-wide boost installation! SBML not found. libXML2 found checking for xml2-config... /usr/bin/xml2-config configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’ using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.1.0.2.5)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -DHAVE_XML -I/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c PathRanker.cpp -o PathRanker.o PathRanker.cpp:27:10: fatal error: 'boost/graph/graph_utility.hpp' file not found #include ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 error generated. make: *** [PathRanker.o] Error 1 ERROR: compilation failed for package ‘NetPathMiner’ * removing ‘/private/tmp/Rtmp8igBas/Rinst7bbd15fd00f0/NetPathMiner’ ----------------------------------- ERROR: package installation failed