##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data GenomicDataCommons
###
##############################################################################
##############################################################################


* checking for file ‘GenomicDataCommons/DESCRIPTION’ ... OK
* preparing ‘GenomicDataCommons’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘overview.Rmd’ using rmarkdown
2025-01-22 16:13:45.214 R[63375:359841926] XType: Using static font registry.
--- finished re-building ‘overview.Rmd’

--- re-building ‘questions-and-answers.Rmd’ using rmarkdown
--- finished re-building ‘questions-and-answers.Rmd’

--- re-building ‘somatic_mutations.Rmd’ using rmarkdown

Quitting from lines 121-123 [unnamed-chunk-13] (somatic_mutations.Rmd)
Error: processing vignette 'somatic_mutations.Rmd' failed with diagnostics:
there is no package called 'maftools'
--- failed re-building ‘somatic_mutations.Rmd’

SUMMARY: processing the following file failed:
  ‘somatic_mutations.Rmd’

Error: Vignette re-building failed.
Execution halted