############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r GBScleanR -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data GBScleanR ### ############################################################################## ############################################################################## * checking for file 'GBScleanR/DESCRIPTION' ... OK * preparing 'GBScleanR': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'BasicUsageOfGBScleanR.rmd' using rmarkdown Quitting from lines 853-856 [unnamed-chunk-100] (BasicUsageOfGBScleanR.rmd) Error: processing vignette 'BasicUsageOfGBScleanR.rmd' failed with diagnostics: Stream Read Error, need 12 byte(s) but receive 0 --- failed re-building 'BasicUsageOfGBScleanR.rmd' SUMMARY: processing the following file failed: 'BasicUsageOfGBScleanR.rmd' Error: Vignette re-building failed. Execution halted