############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data BiocOncoTK ### ############################################################################## ############################################################################## * checking for file ‘BiocOncoTK/DESCRIPTION’ ... OK * preparing ‘BiocOncoTK’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘BiocOncoTK.Rmd’ using rmarkdown Quitting from lines 18-31 [setup] (BiocOncoTK.Rmd) Error: processing vignette 'BiocOncoTK.Rmd' failed with diagnostics: there is no package called 'restfulSE' --- failed re-building ‘BiocOncoTK.Rmd’ --- re-building ‘curatedMSIData.Rmd’ using rmarkdown --- finished re-building ‘curatedMSIData.Rmd’ --- re-building ‘maptcga.Rmd’ using rmarkdown --- finished re-building ‘maptcga.Rmd’ SUMMARY: processing the following file failed: ‘BiocOncoTK.Rmd’ Error: Vignette re-building failed. Execution halted