##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data AneuFinder
###
##############################################################################
##############################################################################


* checking for file ‘AneuFinder/DESCRIPTION’ ... OK
* preparing ‘AneuFinder’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘AneuFinder’ ...
** using staged installation
** libs
using C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -O2  -Wall -Werror=format-security -DR_NO_REMAP -c R_interface.cpp -o R_interface.o
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -O2  -Wall -Werror=format-security -DR_NO_REMAP -c densities.cpp -o densities.o
densities.cpp: In constructor ‘Poisson::Poisson(int*, int, double)’:
densities.cpp:122:66: error: expected primary-expression before ‘double’
  122 |                 this->lxfactorials = (double*) Calloc(max_obs+1, double);
      |                                                                  ^~~~~~
densities.cpp:122:48: error: ‘Calloc’ was not declared in this scope; did you mean ‘calloc’?
  122 |                 this->lxfactorials = (double*) Calloc(max_obs+1, double);
      |                                                ^~~~~~
      |                                                calloc
densities.cpp: In destructor ‘virtual Poisson::~Poisson()’:
densities.cpp:137:17: error: ‘Free’ was not declared in this scope; did you mean ‘free’?
  137 |                 Free(this->lxfactorials);
      |                 ^~~~
      |                 free
densities.cpp: In constructor ‘NegativeBinomial::NegativeBinomial(int*, int, double, double)’:
densities.cpp:344:66: error: expected primary-expression before ‘double’
  344 |                 this->lxfactorials = (double*) Calloc(max_obs+1, double);
      |                                                                  ^~~~~~
densities.cpp:344:48: error: ‘Calloc’ was not declared in this scope; did you mean ‘calloc’?
  344 |                 this->lxfactorials = (double*) Calloc(max_obs+1, double);
      |                                                ^~~~~~
      |                                                calloc
densities.cpp: In destructor ‘virtual NegativeBinomial::~NegativeBinomial()’:
densities.cpp:359:17: error: ‘Free’ was not declared in this scope; did you mean ‘free’?
  359 |                 Free(this->lxfactorials);
      |                 ^~~~
      |                 free
make: *** [/home/biocbuild/R/R/etc/Makeconf:204: densities.o] Error 1
ERROR: compilation failed for package ‘AneuFinder’
* removing ‘/home/biocbuild/tmp/RtmptO9yBh/Rinst1926d7bd2c181/AneuFinder’
      -----------------------------------
ERROR: package installation failed