Francesco Napolitano
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/gep2pep |
| Branch: master |
| Last Commit: 0782762 |
| Last Changed Date: 2019-03-30 19:16:16 -0400 (Sat, 30 Mar 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:35:19 -0400 (Tue, 09 Apr 2019).
| Package 662/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| gep2pep 1.3.1 Francesco Napolitano
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK |
| Package: gep2pep |
| Version: 1.3.1 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/gep2pep_1.3.1.tar.gz && rm -rf gep2pep.buildbin-libdir && mkdir gep2pep.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gep2pep.buildbin-libdir gep2pep_1.3.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL gep2pep_1.3.1.zip && rm gep2pep_1.3.1.tar.gz gep2pep_1.3.1.zip |
| StartedAt: 2019-04-08 18:46:53 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 18:48:09 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 75.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/gep2pep_1.3.1.tar.gz && rm -rf gep2pep.buildbin-libdir && mkdir gep2pep.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gep2pep.buildbin-libdir gep2pep_1.3.1.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL gep2pep_1.3.1.zip && rm gep2pep_1.3.1.tar.gz gep2pep_1.3.1.zip
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install for i386
* installing *source* package 'gep2pep' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'gep2pep'
finding HTML links ... done
CategorizedCollection-class html
CategorizedCollection html
CondSEA html
PathSEA html
addSingleGeneSets html
as.CategorizedCollection html
buildPEPs html
checkRepository html
clearCache html
createMergedRepository html
createRepository html
exportSEA html
gene2pathways html
gep2pep-package html
getCollections html
getDetails html
getResults html
importFromRawMode html
importMSigDB.xml html
loadCollection html
loadESmatrix html
loadPVmatrix html
loadSampleGEP html
loadSamplePWS html
makeCollectionIDs html
openRepository html
setId2setName html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'gep2pep' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gep2pep' as gep2pep_1.3.1.zip
* DONE (gep2pep)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'gep2pep' successfully unpacked and MD5 sums checked